=================
Practical Example
=================

In the following we will demonstrate common preprocessing routines using the API and the GUI. As basis we will use template matching of 80S ribosomes on an *S. pombe* tomogram

1. Tomogram TS_037 from `EMPIAR-10988 <https://www.ebi.ac.uk/empiar/EMPIAR-10988/>`_ [1]_.

2. 80S average `EMD-3228 <https://www.ebi.ac.uk/emdb/EMD-3228>`_.

.. toctree::
   :maxdepth: 2

   api_example
   gui_example

References
----------

.. [1] de Teresa-Trueba, I.; Goetz, S. K.; Mattausch, A.; Stojanovska, F.; Zimmerli, C. E.; Toro-Nahuelpan, M.; Cheng, D. W. C.; Tollervey, F.; Pape, C.; Beck, M.; Diz-Munoz, A.; Kreshuk, A.; Mahamid, J.; Zaugg, J. B. Convolutional networks for supervised mining of molecular patterns within cellular context. Nat. Methods 2023, 20, 284–294.