JupyterFramework
================

.. currentmodule:: colabseg.segmentation_gui

.. autoclass:: JupyterFramework

   

   
   
   

   
   .. rubric:: Methods

   .. autosummary::
      :toctree:
      
         
         
           JupyterFramework.backup_step_to_previous
         
         
           JupyterFramework.boot_gui
         
         
           JupyterFramework.calculate_and_plot_distances_proteins
         
         
           JupyterFramework.calculate_and_plot_sphere_radii
         
         
           JupyterFramework.crop_fit
         
         
           JupyterFramework.dbscan_recluster
         
         
           JupyterFramework.delete_cluster
         
         
           JupyterFramework.delete_fit
         
         
           JupyterFramework.delete_normals
         
         
           JupyterFramework.execute_delete_protein_positions
         
         
           JupyterFramework.execute_load_protein_position
         
         
           JupyterFramework.fit_cylinder
         
         
           JupyterFramework.fit_ellipsoid
         
         
           JupyterFramework.fit_idx_conv
         
         
           JupyterFramework.fit_parametrization
         
         
           JupyterFramework.fit_rbf
         
         
           JupyterFramework.fit_sphere
         
         
           JupyterFramework.flip_normals
         
         
           JupyterFramework.get_and_plot_normals
         
         
           JupyterFramework.get_fit_normals
         
         
           JupyterFramework.gui_elements_cluster_analysis
         
         
           JupyterFramework.gui_elements_loading
         
         
           JupyterFramework.highlight_clusters
         
         
           JupyterFramework.highlight_clusters_size
         
         
           JupyterFramework.highlight_fits
         
         
           JupyterFramework.load_from_point_cloud
         
         
           JupyterFramework.load_from_stl_file
         
         
           JupyterFramework.load_mrc_file
         
         
           JupyterFramework.load_pickle
         
         
           JupyterFramework.load_raw_image
         
         
           JupyterFramework.load_state_hdf
         
         
           JupyterFramework.load_viz
         
         
           JupyterFramework.merge_clusters
         
         
           JupyterFramework.outlier_removal
         
         
           JupyterFramework.plot_cluster_size
         
         
           JupyterFramework.reload_gui
         
         
           JupyterFramework.remove_eigenvalue_outliers
         
         
           JupyterFramework.reset_input
         
         
           JupyterFramework.rotate_back
         
         
           JupyterFramework.rotate_flat
         
         
           JupyterFramework.sample_fit
         
         
           JupyterFramework.save_clusters_mrc
         
         
           JupyterFramework.save_clusters_txt
         
         
           JupyterFramework.save_distance_file
         
         
           JupyterFramework.save_distance_plot
         
         
           JupyterFramework.save_downcloud_txt
         
         
           JupyterFramework.save_normals_file
         
         
           JupyterFramework.save_pickle
         
         
           JupyterFramework.save_radii_file
         
         
           JupyterFramework.save_radii_plot
         
         
           JupyterFramework.save_state_hdf
         
         
           JupyterFramework.split_clusters
         
         
           JupyterFramework.trim_top_bottom
         
         
           JupyterFramework.undo_step
         
         
           JupyterFramework.update_downsampling